Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Urb1Q571H0 Gm42642-201ENSMUST00000200683 355 ntBASIC18.94■□□□□ 0.62
Urb1Q571H0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Urb1Q571H0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Urb1Q571H0 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.94■□□□□ 0.62
Urb1Q571H0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Urb1Q571H0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.94■□□□□ 0.62
Urb1Q571H0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Urb1Q571H0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Urb1Q571H0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Urb1Q571H0 Gm42569-201ENSMUST00000200539 472 ntBASIC18.93■□□□□ 0.62
Urb1Q571H0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Urb1Q571H0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Urb1Q571H0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Urb1Q571H0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Urb1Q571H0 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.91■□□□□ 0.62
Urb1Q571H0 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.91■□□□□ 0.62
Urb1Q571H0 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.91■□□□□ 0.62
Urb1Q571H0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Urb1Q571H0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.91■□□□□ 0.62
Urb1Q571H0 Spcs1-204ENSMUST00000226782 949 ntBASIC18.91■□□□□ 0.62
Urb1Q571H0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Urb1Q571H0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.91■□□□□ 0.62
Urb1Q571H0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Urb1Q571H0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Urb1Q571H0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Urb1Q571H0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.9■□□□□ 0.62
Urb1Q571H0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.9■□□□□ 0.62
Urb1Q571H0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Urb1Q571H0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Urb1Q571H0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Urb1Q571H0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Urb1Q571H0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Urb1Q571H0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Urb1Q571H0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Urb1Q571H0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Urb1Q571H0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Urb1Q571H0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.88■□□□□ 0.61
Urb1Q571H0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Urb1Q571H0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Urb1Q571H0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Urb1Q571H0 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.87■□□□□ 0.61
Urb1Q571H0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Urb1Q571H0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Urb1Q571H0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Urb1Q571H0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Urb1Q571H0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Urb1Q571H0 Gm10033-202ENSMUST00000211874 928 ntBASIC18.86■□□□□ 0.61
Urb1Q571H0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Urb1Q571H0 Gm43060-201ENSMUST00000200621 289 ntBASIC18.86■□□□□ 0.61
Urb1Q571H0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Urb1Q571H0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Urb1Q571H0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Urb1Q571H0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Urb1Q571H0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Urb1Q571H0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.85■□□□□ 0.61
Urb1Q571H0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Urb1Q571H0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.85■□□□□ 0.61
Urb1Q571H0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
Urb1Q571H0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Urb1Q571H0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Urb1Q571H0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Urb1Q571H0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.84■□□□□ 0.61
Urb1Q571H0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Urb1Q571H0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Urb1Q571H0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Urb1Q571H0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Urb1Q571H0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms