Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Pds5bQ4VA53 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC37.01■■■■□ 3.52
Pds5bQ4VA53 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC37.01■■■■□ 3.52
Pds5bQ4VA53 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC37.01■■■■□ 3.51
Pds5bQ4VA53 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC37.01■■■■□ 3.51
Pds5bQ4VA53 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC37.01■■■■□ 3.51
Pds5bQ4VA53 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
Pds5bQ4VA53 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
Pds5bQ4VA53 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Pds5bQ4VA53 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC37■■■■□ 3.51
Pds5bQ4VA53 Gm6934-201ENSMUST00000194780 1905 ntBASIC37■■■■□ 3.51
Pds5bQ4VA53 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC36.99■■■■□ 3.51
Pds5bQ4VA53 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Pds5bQ4VA53 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pds5bQ4VA53 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pds5bQ4VA53 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pds5bQ4VA53 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC36.98■■■■□ 3.51
Pds5bQ4VA53 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pds5bQ4VA53 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Pds5bQ4VA53 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Pds5bQ4VA53 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Pds5bQ4VA53 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC36.97■■■■□ 3.51
Pds5bQ4VA53 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Pds5bQ4VA53 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC36.96■■■■□ 3.51
Pds5bQ4VA53 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Pds5bQ4VA53 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC36.96■■■■□ 3.51
Pds5bQ4VA53 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Pds5bQ4VA53 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Pds5bQ4VA53 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Pds5bQ4VA53 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC36.95■■■■□ 3.51
Pds5bQ4VA53 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC36.95■■■■□ 3.51
Pds5bQ4VA53 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC36.95■■■■□ 3.51
Pds5bQ4VA53 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC36.95■■■■□ 3.51
Pds5bQ4VA53 Gm22240-201ENSMUST00000175225 82 ntBASIC36.94■■■■□ 3.5
Pds5bQ4VA53 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Pds5bQ4VA53 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC36.93■■■■□ 3.5
Pds5bQ4VA53 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC36.93■■■■□ 3.5
Pds5bQ4VA53 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC36.93■■■■□ 3.5
Pds5bQ4VA53 Gm20760-201ENSMUST00000179197 648 ntBASIC36.93■■■■□ 3.5
Pds5bQ4VA53 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC36.93■■■■□ 3.5
Pds5bQ4VA53 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Pds5bQ4VA53 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC36.92■■■■□ 3.5
Pds5bQ4VA53 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC36.92■■■■□ 3.5
Pds5bQ4VA53 Gm11421-201ENSMUST00000122124 294 ntBASIC36.92■■■■□ 3.5
Pds5bQ4VA53 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Pds5bQ4VA53 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC36.92■■■■□ 3.5
Pds5bQ4VA53 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC36.91■■■■□ 3.5
Pds5bQ4VA53 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
Pds5bQ4VA53 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
Pds5bQ4VA53 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC36.9■■■■□ 3.5
Pds5bQ4VA53 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Pds5bQ4VA53 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
Pds5bQ4VA53 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
Pds5bQ4VA53 Gm4968-201ENSMUST00000071458 858 ntBASIC36.89■■■■□ 3.5
Pds5bQ4VA53 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC36.89■■■■□ 3.5
Pds5bQ4VA53 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC36.88■■■■□ 3.49
Pds5bQ4VA53 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC36.87■■■■□ 3.49
Pds5bQ4VA53 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Pds5bQ4VA53 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Pds5bQ4VA53 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Pds5bQ4VA53 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC36.85■■■■□ 3.49
Pds5bQ4VA53 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC36.85■■■■□ 3.49
Pds5bQ4VA53 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Pds5bQ4VA53 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Pds5bQ4VA53 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC36.85■■■■□ 3.49
Pds5bQ4VA53 Mir7071-201ENSMUST00000184847 69 ntBASIC36.85■■■■□ 3.49
Pds5bQ4VA53 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Pds5bQ4VA53 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC36.84■■■■□ 3.49
Pds5bQ4VA53 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Pds5bQ4VA53 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC36.84■■■■□ 3.49
Pds5bQ4VA53 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC36.84■■■■□ 3.49
Pds5bQ4VA53 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Pds5bQ4VA53 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Pds5bQ4VA53 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Pds5bQ4VA53 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
Pds5bQ4VA53 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC36.81■■■■□ 3.48
Pds5bQ4VA53 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC36.81■■■■□ 3.48
Pds5bQ4VA53 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC36.81■■■■□ 3.48
Pds5bQ4VA53 Gm12527-201ENSMUST00000117967 564 ntBASIC36.79■■■■□ 3.48
Pds5bQ4VA53 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC36.79■■■■□ 3.48
Pds5bQ4VA53 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC36.79■■■■□ 3.48
Pds5bQ4VA53 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC36.79■■■■□ 3.48
Pds5bQ4VA53 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Pds5bQ4VA53 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Gm13234-201ENSMUST00000120010 747 ntBASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Pds5bQ4VA53 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC36.77■■■■□ 3.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms