Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.98■■□□□ 1.43
Ddx49Q4FZF3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx49Q4FZF3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ddx49Q4FZF3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx49Q4FZF3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Ddx49Q4FZF3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Gm26833-201ENSMUST00000180899 440 ntBASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Gm27405-201ENSMUST00000184201 112 ntBASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Gm10493-201ENSMUST00000097270 612 ntBASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Ddx49Q4FZF3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx49Q4FZF3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx49Q4FZF3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx49Q4FZF3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Ddx49Q4FZF3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.95■■□□□ 1.42
Ddx49Q4FZF3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.42
Ddx49Q4FZF3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx49Q4FZF3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx49Q4FZF3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx49Q4FZF3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Gm43060-201ENSMUST00000200621 289 ntBASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx49Q4FZF3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx49Q4FZF3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx49Q4FZF3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx49Q4FZF3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Ddx49Q4FZF3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx49Q4FZF3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Ddx49Q4FZF3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Spcs1-204ENSMUST00000226782 949 ntBASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx49Q4FZF3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx49Q4FZF3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Ddx49Q4FZF3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx49Q4FZF3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx49Q4FZF3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx49Q4FZF3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Ddx49Q4FZF3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ddx49Q4FZF3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ddx49Q4FZF3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
Ddx49Q4FZF3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx49Q4FZF3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Ddx49Q4FZF3 Gm42642-201ENSMUST00000200683 355 ntBASIC23.89■■□□□ 1.41
Ddx49Q4FZF3 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.89■■□□□ 1.41
Ddx49Q4FZF3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx49Q4FZF3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx49Q4FZF3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx49Q4FZF3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.88■■□□□ 1.41
Ddx49Q4FZF3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx49Q4FZF3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ddx49Q4FZF3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx49Q4FZF3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ddx49Q4FZF3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Gm10849-201ENSMUST00000100397 618 ntBASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx49Q4FZF3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx49Q4FZF3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx49Q4FZF3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx49Q4FZF3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
Ddx49Q4FZF3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx49Q4FZF3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx49Q4FZF3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx49Q4FZF3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.85■■□□□ 1.41
Ddx49Q4FZF3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms