Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnga4Q3UW12 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cnga4Q3UW12 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnga4Q3UW12 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cnga4Q3UW12 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cnga4Q3UW12 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cnga4Q3UW12 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.83■□□□□ 0.93
Cnga4Q3UW12 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnga4Q3UW12 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Cnga4Q3UW12 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cnga4Q3UW12 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cnga4Q3UW12 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cnga4Q3UW12 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cnga4Q3UW12 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.8■□□□□ 0.92
Cnga4Q3UW12 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cnga4Q3UW12 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnga4Q3UW12 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnga4Q3UW12 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cnga4Q3UW12 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnga4Q3UW12 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnga4Q3UW12 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cnga4Q3UW12 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cnga4Q3UW12 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.78■□□□□ 0.92
Cnga4Q3UW12 Gm9806-201ENSMUST00000051080 552 ntBASIC20.78■□□□□ 0.92
Cnga4Q3UW12 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cnga4Q3UW12 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cnga4Q3UW12 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Scarna2-201ENSMUST00000157560 414 ntBASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Gm16437-201ENSMUST00000025669 507 ntBASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cnga4Q3UW12 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnga4Q3UW12 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms