Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Arhgef40Q3UPH7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Arhgef40Q3UPH7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Arhgef40Q3UPH7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Arhgef40Q3UPH7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC30.9■■■□□ 2.54
Arhgef40Q3UPH7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Arhgef40Q3UPH7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Arhgef40Q3UPH7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Arhgef40Q3UPH7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Arhgef40Q3UPH7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC30.89■■■□□ 2.54
Arhgef40Q3UPH7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Arhgef40Q3UPH7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Arhgef40Q3UPH7 Gm42418-201ENSMUST00000182010 1831 ntBASIC30.89■■■□□ 2.54
Arhgef40Q3UPH7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Gm27011-201ENSMUST00000182352 972 ntBASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Arhgef40Q3UPH7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Arhgef40Q3UPH7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Arhgef40Q3UPH7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC30.87■■■□□ 2.53
Arhgef40Q3UPH7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Arhgef40Q3UPH7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Arhgef40Q3UPH7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Arhgef40Q3UPH7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 Gm26571-201ENSMUST00000181399 666 ntBASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Arhgef40Q3UPH7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC30.85■■■□□ 2.53
Arhgef40Q3UPH7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Arhgef40Q3UPH7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Arhgef40Q3UPH7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Arhgef40Q3UPH7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC30.84■■■□□ 2.53
Arhgef40Q3UPH7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Arhgef40Q3UPH7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Arhgef40Q3UPH7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Arhgef40Q3UPH7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Arhgef40Q3UPH7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Arhgef40Q3UPH7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Arhgef40Q3UPH7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Arhgef40Q3UPH7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Gm7160-202ENSMUST00000188519 1027 ntBASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Arhgef40Q3UPH7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Arhgef40Q3UPH7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Arhgef40Q3UPH7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC30.8■■■□□ 2.52
Arhgef40Q3UPH7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Arhgef40Q3UPH7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Arhgef40Q3UPH7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Arhgef40Q3UPH7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Arhgef40Q3UPH7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 AC112142.1-201ENSMUST00000228796 918 ntBASIC30.78■■■□□ 2.52
Arhgef40Q3UPH7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 Gm26833-201ENSMUST00000180899 440 ntBASIC30.77■■■□□ 2.52
Arhgef40Q3UPH7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC30.76■■■□□ 2.51
Arhgef40Q3UPH7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC30.75■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms