Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rnf44Q3UHJ8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Rnf44Q3UHJ8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rnf44Q3UHJ8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf44Q3UHJ8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf44Q3UHJ8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf44Q3UHJ8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf44Q3UHJ8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Rnf44Q3UHJ8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf44Q3UHJ8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf44Q3UHJ8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf44Q3UHJ8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.8■□□□□ 0.76
Rnf44Q3UHJ8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Rnf44Q3UHJ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf44Q3UHJ8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf44Q3UHJ8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf44Q3UHJ8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf44Q3UHJ8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf44Q3UHJ8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms