Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc4Q08624 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hoxc4Q08624 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.92■□□□□ 0.78
Hoxc4Q08624 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.92■□□□□ 0.78
Hoxc4Q08624 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc4Q08624 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.91■□□□□ 0.78
Hoxc4Q08624 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc4Q08624 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Hoxc4Q08624 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc4Q08624 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc4Q08624 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc4Q08624 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.9■□□□□ 0.78
Hoxc4Q08624 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hoxc4Q08624 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc4Q08624 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Hoxc4Q08624 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc4Q08624 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hoxc4Q08624 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hoxc4Q08624 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc4Q08624 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc4Q08624 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc4Q08624 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.89■□□□□ 0.77
Hoxc4Q08624 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hoxc4Q08624 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Hoxc4Q08624 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc4Q08624 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Serp2-204ENSMUST00000228055 705 ntBASIC19.88■□□□□ 0.77
Hoxc4Q08624 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Gm6139-201ENSMUST00000079261 882 ntBASIC19.88■□□□□ 0.77
Hoxc4Q08624 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc4Q08624 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc4Q08624 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc4Q08624 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc4Q08624 Mir7075-201ENSMUST00000184187 82 ntBASIC19.85■□□□□ 0.77
Hoxc4Q08624 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Hoxc4Q08624 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc4Q08624 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.84■□□□□ 0.77
Hoxc4Q08624 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc4Q08624 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc4Q08624 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Hoxc4Q08624 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc4Q08624 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc4Q08624 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc4Q08624 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc4Q08624 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.83■□□□□ 0.77
Hoxc4Q08624 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc4Q08624 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc4Q08624 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.83■□□□□ 0.76
Hoxc4Q08624 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc4Q08624 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.82■□□□□ 0.76
Hoxc4Q08624 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc4Q08624 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.82■□□□□ 0.76
Hoxc4Q08624 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc4Q08624 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc4Q08624 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc4Q08624 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms