Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tff1Q08423 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tff1Q08423 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tff1Q08423 Gm9959-201ENSMUST00000068277 390 ntBASIC16.96■□□□□ 0.31
Tff1Q08423 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tff1Q08423 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tff1Q08423 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tff1Q08423 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.95■□□□□ 0.3
Tff1Q08423 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tff1Q08423 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.95■□□□□ 0.3
Tff1Q08423 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tff1Q08423 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tff1Q08423 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tff1Q08423 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tff1Q08423 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tff1Q08423 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Tff1Q08423 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tff1Q08423 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.93■□□□□ 0.3
Tff1Q08423 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.93■□□□□ 0.3
Tff1Q08423 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tff1Q08423 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Tff1Q08423 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Tff1Q08423 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tff1Q08423 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tff1Q08423 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tff1Q08423 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.91■□□□□ 0.3
Tff1Q08423 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.91■□□□□ 0.3
Tff1Q08423 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.91■□□□□ 0.3
Tff1Q08423 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.91■□□□□ 0.3
Tff1Q08423 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tff1Q08423 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tff1Q08423 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tff1Q08423 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tff1Q08423 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.9■□□□□ 0.3
Tff1Q08423 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tff1Q08423 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tff1Q08423 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tff1Q08423 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tff1Q08423 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tff1Q08423 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tff1Q08423 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tff1Q08423 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tff1Q08423 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tff1Q08423 Notumos-201ENSMUST00000151998 2659 ntBASIC16.89■□□□□ 0.29
Tff1Q08423 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tff1Q08423 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.89■□□□□ 0.29
Tff1Q08423 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.89■□□□□ 0.29
Tff1Q08423 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tff1Q08423 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tff1Q08423 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tff1Q08423 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tff1Q08423 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tff1Q08423 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tff1Q08423 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tff1Q08423 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tff1Q08423 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tff1Q08423 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.88■□□□□ 0.29
Tff1Q08423 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tff1Q08423 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tff1Q08423 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Tff1Q08423 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Tff1Q08423 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.87■□□□□ 0.29
Tff1Q08423 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.87■□□□□ 0.29
Tff1Q08423 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tff1Q08423 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms