Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smad4P97471 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smad4P97471 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smad4P97471 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smad4P97471 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.95■□□□□ 0.94
Smad4P97471 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smad4P97471 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.95■□□□□ 0.94
Smad4P97471 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smad4P97471 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smad4P97471 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smad4P97471 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smad4P97471 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smad4P97471 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Smad4P97471 Nespas-201ENSMUST00000143738 1083 ntBASIC20.94■□□□□ 0.94
Smad4P97471 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smad4P97471 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.94■□□□□ 0.94
Smad4P97471 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smad4P97471 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smad4P97471 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smad4P97471 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Smad4P97471 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smad4P97471 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.93■□□□□ 0.94
Smad4P97471 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Smad4P97471 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smad4P97471 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smad4P97471 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.93■□□□□ 0.94
Smad4P97471 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smad4P97471 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.92■□□□□ 0.94
Smad4P97471 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smad4P97471 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.91■□□□□ 0.94
Smad4P97471 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smad4P97471 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Smad4P97471 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smad4P97471 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Smad4P97471 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smad4P97471 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smad4P97471 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.89■□□□□ 0.93
Smad4P97471 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smad4P97471 Gm11421-201ENSMUST00000122124 294 ntBASIC20.89■□□□□ 0.93
Smad4P97471 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smad4P97471 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.88■□□□□ 0.93
Smad4P97471 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smad4P97471 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smad4P97471 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.88■□□□□ 0.93
Smad4P97471 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smad4P97471 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Smad4P97471 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smad4P97471 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smad4P97471 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.87■□□□□ 0.93
Smad4P97471 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smad4P97471 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smad4P97471 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Smad4P97471 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smad4P97471 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smad4P97471 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smad4P97471 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smad4P97471 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smad4P97471 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smad4P97471 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smad4P97471 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smad4P97471 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smad4P97471 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.86■□□□□ 0.93
Smad4P97471 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smad4P97471 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smad4P97471 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smad4P97471 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.85■□□□□ 0.93
Smad4P97471 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.85■□□□□ 0.93
Smad4P97471 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.85■□□□□ 0.93
Smad4P97471 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Smad4P97471 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smad4P97471 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Smad4P97471 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smad4P97471 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.84■□□□□ 0.93
Smad4P97471 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smad4P97471 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smad4P97471 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smad4P97471 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Smad4P97471 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smad4P97471 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Smad4P97471 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.93
Smad4P97471 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.83■□□□□ 0.93
Smad4P97471 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.83■□□□□ 0.93
Smad4P97471 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.83■□□□□ 0.93
Smad4P97471 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.83■□□□□ 0.93
Smad4P97471 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms