Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SgcdP82347 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SgcdP82347 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.85■□□□□ 0.61
SgcdP82347 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.85■□□□□ 0.61
SgcdP82347 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SgcdP82347 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SgcdP82347 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.85■□□□□ 0.61
SgcdP82347 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SgcdP82347 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SgcdP82347 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcdP82347 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SgcdP82347 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SgcdP82347 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SgcdP82347 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SgcdP82347 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SgcdP82347 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SgcdP82347 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SgcdP82347 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.82■□□□□ 0.6
SgcdP82347 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcdP82347 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SgcdP82347 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcdP82347 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
SgcdP82347 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SgcdP82347 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcdP82347 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SgcdP82347 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SgcdP82347 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcdP82347 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.81■□□□□ 0.6
SgcdP82347 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
SgcdP82347 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SgcdP82347 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SgcdP82347 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SgcdP82347 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.81■□□□□ 0.6
SgcdP82347 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcdP82347 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcdP82347 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.8■□□□□ 0.6
SgcdP82347 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcdP82347 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcdP82347 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SgcdP82347 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.79■□□□□ 0.6
SgcdP82347 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcdP82347 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SgcdP82347 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcdP82347 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SgcdP82347 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcdP82347 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcdP82347 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SgcdP82347 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcdP82347 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SgcdP82347 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SgcdP82347 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SgcdP82347 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SgcdP82347 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SgcdP82347 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.76■□□□□ 0.59
SgcdP82347 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SgcdP82347 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcdP82347 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SgcdP82347 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcdP82347 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcdP82347 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcdP82347 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcdP82347 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SgcdP82347 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SgcdP82347 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcdP82347 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SgcdP82347 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SgcdP82347 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcdP82347 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SgcdP82347 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SgcdP82347 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
SgcdP82347 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SgcdP82347 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcdP82347 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcdP82347 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcdP82347 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SgcdP82347 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms