Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ThraP63058 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ThraP63058 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ThraP63058 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ThraP63058 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ThraP63058 Gm10399-202ENSMUST00000202768 748 ntBASIC20.68■□□□□ 0.9
ThraP63058 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ThraP63058 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ThraP63058 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ThraP63058 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ThraP63058 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.67■□□□□ 0.9
ThraP63058 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Gm13241-201ENSMUST00000094493 780 ntBASIC20.67■□□□□ 0.9
ThraP63058 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ThraP63058 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ThraP63058 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ThraP63058 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.66■□□□□ 0.9
ThraP63058 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ThraP63058 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ThraP63058 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ThraP63058 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ThraP63058 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ThraP63058 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ThraP63058 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ThraP63058 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ThraP63058 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ThraP63058 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ThraP63058 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.65■□□□□ 0.9
ThraP63058 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.65■□□□□ 0.9
ThraP63058 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ThraP63058 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.65■□□□□ 0.9
ThraP63058 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ThraP63058 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ThraP63058 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ThraP63058 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ThraP63058 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ThraP63058 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ThraP63058 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ThraP63058 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ThraP63058 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ThraP63058 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ThraP63058 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 Gm9847-201ENSMUST00000052528 599 ntBASIC20.63■□□□□ 0.89
ThraP63058 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ThraP63058 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ThraP63058 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.62■□□□□ 0.89
ThraP63058 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ThraP63058 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ThraP63058 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.62■□□□□ 0.89
ThraP63058 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ThraP63058 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ThraP63058 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ThraP63058 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ThraP63058 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.6■□□□□ 0.89
ThraP63058 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ThraP63058 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ThraP63058 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ThraP63058 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ThraP63058 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ThraP63058 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ThraP63058 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.59■□□□□ 0.89
ThraP63058 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ThraP63058 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ThraP63058 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms