Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sec61a1P61620 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sec61a1P61620 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sec61a1P61620 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a1P61620 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a1P61620 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a1P61620 Gm15820-201ENSMUST00000201566 728 ntBASIC17.93■□□□□ 0.46
Sec61a1P61620 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.93■□□□□ 0.46
Sec61a1P61620 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a1P61620 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a1P61620 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a1P61620 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a1P61620 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a1P61620 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.92■□□□□ 0.46
Sec61a1P61620 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.92■□□□□ 0.46
Sec61a1P61620 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.92■□□□□ 0.46
Sec61a1P61620 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a1P61620 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.92■□□□□ 0.46
Sec61a1P61620 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a1P61620 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.92■□□□□ 0.46
Sec61a1P61620 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sec61a1P61620 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Golph3-202ENSMUST00000226517 2359 ntBASIC17.91■□□□□ 0.46
Sec61a1P61620 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sec61a1P61620 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a1P61620 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.9■□□□□ 0.46
Sec61a1P61620 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.9■□□□□ 0.46
Sec61a1P61620 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a1P61620 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.89■□□□□ 0.46
Sec61a1P61620 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sec61a1P61620 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sec61a1P61620 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sec61a1P61620 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a1P61620 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sec61a1P61620 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Sec61a1P61620 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sec61a1P61620 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Sec61a1P61620 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.88■□□□□ 0.45
Sec61a1P61620 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a1P61620 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Sec61a1P61620 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a1P61620 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sec61a1P61620 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a1P61620 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a1P61620 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a1P61620 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sec61a1P61620 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a1P61620 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a1P61620 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sec61a1P61620 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a1P61620 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sec61a1P61620 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sec61a1P61620 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a1P61620 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sec61a1P61620 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a1P61620 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a1P61620 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a1P61620 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a1P61620 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a1P61620 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a1P61620 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sec61a1P61620 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sec61a1P61620 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a1P61620 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms