Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SmoP56726 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SmoP56726 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SmoP56726 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.76■□□□□ 0.91
SmoP56726 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SmoP56726 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SmoP56726 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SmoP56726 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SmoP56726 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SmoP56726 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SmoP56726 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SmoP56726 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SmoP56726 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SmoP56726 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.74■□□□□ 0.91
SmoP56726 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SmoP56726 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SmoP56726 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SmoP56726 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SmoP56726 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SmoP56726 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SmoP56726 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.73■□□□□ 0.91
SmoP56726 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SmoP56726 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
SmoP56726 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.72■□□□□ 0.91
SmoP56726 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.72■□□□□ 0.91
SmoP56726 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.72■□□□□ 0.91
SmoP56726 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SmoP56726 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SmoP56726 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SmoP56726 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
SmoP56726 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.7■□□□□ 0.9
SmoP56726 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SmoP56726 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SmoP56726 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SmoP56726 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.69■□□□□ 0.9
SmoP56726 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SmoP56726 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.68■□□□□ 0.9
SmoP56726 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
SmoP56726 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.68■□□□□ 0.9
SmoP56726 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SmoP56726 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SmoP56726 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SmoP56726 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SmoP56726 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SmoP56726 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SmoP56726 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SmoP56726 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SmoP56726 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
SmoP56726 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SmoP56726 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.65■□□□□ 0.9
SmoP56726 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SmoP56726 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SmoP56726 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SmoP56726 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms