Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cks2P56390 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cks2P56390 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cks2P56390 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks2P56390 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks2P56390 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cks2P56390 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks2P56390 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cks2P56390 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.09■□□□□ 0.33
Cks2P56390 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.09■□□□□ 0.33
Cks2P56390 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.09■□□□□ 0.33
Cks2P56390 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.09■□□□□ 0.33
Cks2P56390 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks2P56390 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cks2P56390 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cks2P56390 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cks2P56390 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cks2P56390 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.08■□□□□ 0.32
Cks2P56390 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cks2P56390 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cks2P56390 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cks2P56390 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cks2P56390 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cks2P56390 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cks2P56390 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cks2P56390 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.07■□□□□ 0.32
Cks2P56390 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks2P56390 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.07■□□□□ 0.32
Cks2P56390 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Cks2P56390 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cks2P56390 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks2P56390 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cks2P56390 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks2P56390 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cks2P56390 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cks2P56390 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.06■□□□□ 0.32
Cks2P56390 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.06■□□□□ 0.32
Cks2P56390 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks2P56390 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.05■□□□□ 0.32
Cks2P56390 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cks2P56390 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks2P56390 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cks2P56390 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cks2P56390 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.04■□□□□ 0.32
Cks2P56390 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cks2P56390 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks2P56390 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.03■□□□□ 0.32
Cks2P56390 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.03■□□□□ 0.32
Cks2P56390 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks2P56390 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.02■□□□□ 0.32
Cks2P56390 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks2P56390 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks2P56390 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks2P56390 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks2P56390 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms