Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx6P54823 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx6P54823 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ddx6P54823 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx6P54823 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ddx6P54823 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 Gm43017-201ENSMUST00000198296 752 ntBASIC21.03■□□□□ 0.96
Ddx6P54823 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ddx6P54823 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx6P54823 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx6P54823 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx6P54823 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx6P54823 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx6P54823 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx6P54823 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx6P54823 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx6P54823 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx6P54823 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx6P54823 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
Ddx6P54823 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ddx6P54823 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx6P54823 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Ddx6P54823 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21■□□□□ 0.95
Ddx6P54823 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21■□□□□ 0.95
Ddx6P54823 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx6P54823 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx6P54823 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx6P54823 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.99■□□□□ 0.95
Ddx6P54823 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.99■□□□□ 0.95
Ddx6P54823 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx6P54823 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx6P54823 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx6P54823 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.98■□□□□ 0.95
Ddx6P54823 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.98■□□□□ 0.95
Ddx6P54823 Gm8495-201ENSMUST00000188740 694 ntBASIC20.98■□□□□ 0.95
Ddx6P54823 Gm43173-201ENSMUST00000202246 593 ntBASIC20.98■□□□□ 0.95
Ddx6P54823 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx6P54823 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx6P54823 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx6P54823 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.97■□□□□ 0.95
Ddx6P54823 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Ddx6P54823 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx6P54823 Gm18284-201ENSMUST00000172604 624 ntBASIC20.97■□□□□ 0.95
Ddx6P54823 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx6P54823 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.97■□□□□ 0.95
Ddx6P54823 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx6P54823 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ddx6P54823 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.97■□□□□ 0.95
Ddx6P54823 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx6P54823 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx6P54823 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx6P54823 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx6P54823 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Ddx6P54823 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ddx6P54823 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Ddx6P54823 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Spcs1-204ENSMUST00000226782 949 ntBASIC20.95■□□□□ 0.94
Ddx6P54823 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx6P54823 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx6P54823 Gm12251-201ENSMUST00000117893 792 ntBASIC20.94■□□□□ 0.94
Ddx6P54823 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx6P54823 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.94■□□□□ 0.94
Ddx6P54823 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx6P54823 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx6P54823 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Ddx6P54823 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx6P54823 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ddx6P54823 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ddx6P54823 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx6P54823 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.93■□□□□ 0.94
Ddx6P54823 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx6P54823 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx6P54823 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms