Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lbx1P52955 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lbx1P52955 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Lbx1P52955 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lbx1P52955 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.13■□□□□ 0.81
Lbx1P52955 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.13■□□□□ 0.81
Lbx1P52955 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lbx1P52955 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lbx1P52955 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lbx1P52955 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lbx1P52955 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lbx1P52955 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.12■□□□□ 0.81
Lbx1P52955 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Lbx1P52955 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lbx1P52955 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lbx1P52955 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.11■□□□□ 0.81
Lbx1P52955 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lbx1P52955 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lbx1P52955 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Lbx1P52955 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lbx1P52955 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lbx1P52955 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lbx1P52955 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lbx1P52955 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lbx1P52955 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lbx1P52955 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lbx1P52955 Gm9988-201ENSMUST00000069786 435 ntBASIC20.1■□□□□ 0.81
Lbx1P52955 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Lbx1P52955 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lbx1P52955 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.09■□□□□ 0.81
Lbx1P52955 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lbx1P52955 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lbx1P52955 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lbx1P52955 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
Lbx1P52955 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lbx1P52955 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lbx1P52955 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lbx1P52955 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lbx1P52955 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lbx1P52955 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lbx1P52955 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lbx1P52955 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
Lbx1P52955 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lbx1P52955 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.07■□□□□ 0.8
Lbx1P52955 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lbx1P52955 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Lbx1P52955 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lbx1P52955 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lbx1P52955 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lbx1P52955 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.06■□□□□ 0.8
Lbx1P52955 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lbx1P52955 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Lbx1P52955 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lbx1P52955 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lbx1P52955 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Lbx1P52955 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lbx1P52955 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lbx1P52955 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lbx1P52955 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.05■□□□□ 0.8
Lbx1P52955 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lbx1P52955 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
Lbx1P52955 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lbx1P52955 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lbx1P52955 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lbx1P52955 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lbx1P52955 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lbx1P52955 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lbx1P52955 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lbx1P52955 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lbx1P52955 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lbx1P52955 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lbx1P52955 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.03■□□□□ 0.8
Lbx1P52955 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.03■□□□□ 0.8
Lbx1P52955 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lbx1P52955 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lbx1P52955 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lbx1P52955 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.02■□□□□ 0.8
Lbx1P52955 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lbx1P52955 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lbx1P52955 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lbx1P52955 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.01■□□□□ 0.79
Lbx1P52955 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.01■□□□□ 0.79
Lbx1P52955 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.01■□□□□ 0.79
Lbx1P52955 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lbx1P52955 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.01■□□□□ 0.79
Lbx1P52955 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Lbx1P52955 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Lbx1P52955 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lbx1P52955 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lbx1P52955 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Lbx1P52955 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lbx1P52955 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lbx1P52955 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms