Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CntfP51642 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CntfP51642 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CntfP51642 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CntfP51642 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CntfP51642 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CntfP51642 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.25■□□□□ 0.67
CntfP51642 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CntfP51642 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CntfP51642 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CntfP51642 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.23■□□□□ 0.67
CntfP51642 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CntfP51642 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CntfP51642 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.23■□□□□ 0.67
CntfP51642 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CntfP51642 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CntfP51642 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CntfP51642 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CntfP51642 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.22■□□□□ 0.67
CntfP51642 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CntfP51642 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CntfP51642 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.22■□□□□ 0.67
CntfP51642 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CntfP51642 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.21■□□□□ 0.67
CntfP51642 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.21■□□□□ 0.67
CntfP51642 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CntfP51642 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CntfP51642 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.2■□□□□ 0.66
CntfP51642 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.2■□□□□ 0.66
CntfP51642 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CntfP51642 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CntfP51642 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.19■□□□□ 0.66
CntfP51642 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CntfP51642 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CntfP51642 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CntfP51642 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CntfP51642 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CntfP51642 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CntfP51642 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CntfP51642 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CntfP51642 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CntfP51642 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CntfP51642 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CntfP51642 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CntfP51642 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.17■□□□□ 0.66
CntfP51642 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.17■□□□□ 0.66
CntfP51642 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CntfP51642 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CntfP51642 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CntfP51642 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Cap2-205ENSMUST00000225824 1634 ntBASIC19.16■□□□□ 0.66
CntfP51642 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.16■□□□□ 0.66
CntfP51642 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.16■□□□□ 0.66
CntfP51642 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CntfP51642 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CntfP51642 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CntfP51642 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms