Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rfx3P48381 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.49■□□□□ 0.55
Rfx3P48381 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.49■□□□□ 0.55
Rfx3P48381 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.49■□□□□ 0.55
Rfx3P48381 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.49■□□□□ 0.55
Rfx3P48381 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx3P48381 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rfx3P48381 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx3P48381 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx3P48381 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx3P48381 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rfx3P48381 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.48■□□□□ 0.55
Rfx3P48381 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rfx3P48381 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx3P48381 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rfx3P48381 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.47■□□□□ 0.55
Rfx3P48381 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.47■□□□□ 0.55
Rfx3P48381 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx3P48381 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rfx3P48381 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rfx3P48381 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rfx3P48381 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx3P48381 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx3P48381 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx3P48381 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
Rfx3P48381 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx3P48381 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx3P48381 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfx3P48381 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.45■□□□□ 0.54
Rfx3P48381 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx3P48381 Gm45444-201ENSMUST00000211394 898 ntBASIC18.45■□□□□ 0.54
Rfx3P48381 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfx3P48381 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx3P48381 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rfx3P48381 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx3P48381 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx3P48381 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx3P48381 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx3P48381 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rfx3P48381 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx3P48381 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rfx3P48381 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfx3P48381 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.42■□□□□ 0.54
Rfx3P48381 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.42■□□□□ 0.54
Rfx3P48381 Gm5921-201ENSMUST00000075898 882 ntBASIC18.42■□□□□ 0.54
Rfx3P48381 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx3P48381 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx3P48381 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx3P48381 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx3P48381 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.41■□□□□ 0.54
Rfx3P48381 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx3P48381 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx3P48381 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Rfx3P48381 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rfx3P48381 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx3P48381 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.4■□□□□ 0.54
Rfx3P48381 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx3P48381 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx3P48381 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx3P48381 Iqck-206ENSMUST00000208658 2891 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms