Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Abca1P41233 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca1P41233 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Abca1P41233 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abca1P41233 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.97■□□□□ 0.31
Abca1P41233 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca1P41233 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abca1P41233 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca1P41233 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca1P41233 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Abca1P41233 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.96■□□□□ 0.31
Abca1P41233 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Abca1P41233 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.96■□□□□ 0.31
Abca1P41233 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca1P41233 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.96■□□□□ 0.31
Abca1P41233 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca1P41233 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Abca1P41233 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Abca1P41233 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Abca1P41233 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca1P41233 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abca1P41233 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca1P41233 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Abca1P41233 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Abca1P41233 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 Gm26571-201ENSMUST00000181399 666 ntBASIC16.95■□□□□ 0.3
Abca1P41233 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.95■□□□□ 0.3
Abca1P41233 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
Abca1P41233 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.95■□□□□ 0.3
Abca1P41233 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Abca1P41233 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca1P41233 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Abca1P41233 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Gm43017-201ENSMUST00000198296 752 ntBASIC16.94■□□□□ 0.3
Abca1P41233 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Abca1P41233 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Abca1P41233 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.94■□□□□ 0.3
Abca1P41233 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.94■□□□□ 0.3
Abca1P41233 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.94■□□□□ 0.3
Abca1P41233 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca1P41233 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca1P41233 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca1P41233 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca1P41233 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.92■□□□□ 0.3
Abca1P41233 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.92■□□□□ 0.3
Abca1P41233 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.92■□□□□ 0.3
Abca1P41233 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.92■□□□□ 0.3
Abca1P41233 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Abca1P41233 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.91■□□□□ 0.3
Abca1P41233 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abca1P41233 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.91■□□□□ 0.3
Abca1P41233 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.91■□□□□ 0.3
Abca1P41233 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca1P41233 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.91■□□□□ 0.3
Abca1P41233 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abca1P41233 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.91■□□□□ 0.3
Abca1P41233 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca1P41233 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca1P41233 Gm43173-201ENSMUST00000202246 593 ntBASIC16.9■□□□□ 0.3
Abca1P41233 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Abca1P41233 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Abca1P41233 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca1P41233 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Abca1P41233 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Abca1P41233 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Abca1P41233 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.9■□□□□ 0.3
Abca1P41233 Gm8493-201ENSMUST00000196881 489 ntBASIC16.9■□□□□ 0.3
Abca1P41233 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.9■□□□□ 0.3
Abca1P41233 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca1P41233 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abca1P41233 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Abca1P41233 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Abca1P41233 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca1P41233 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abca1P41233 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abca1P41233 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.89■□□□□ 0.29
Abca1P41233 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms