Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.4■□□□□ 0.86
LdlrP35951 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.4■□□□□ 0.86
LdlrP35951 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LdlrP35951 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LdlrP35951 Gm9959-201ENSMUST00000068277 390 ntBASIC20.4■□□□□ 0.86
LdlrP35951 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LdlrP35951 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LdlrP35951 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LdlrP35951 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LdlrP35951 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LdlrP35951 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LdlrP35951 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LdlrP35951 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LdlrP35951 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LdlrP35951 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LdlrP35951 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LdlrP35951 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.39■□□□□ 0.85
LdlrP35951 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LdlrP35951 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.38■□□□□ 0.85
LdlrP35951 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LdlrP35951 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LdlrP35951 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LdlrP35951 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LdlrP35951 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LdlrP35951 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LdlrP35951 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LdlrP35951 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LdlrP35951 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LdlrP35951 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LdlrP35951 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LdlrP35951 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.36■□□□□ 0.85
LdlrP35951 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.36■□□□□ 0.85
LdlrP35951 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LdlrP35951 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LdlrP35951 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.35■□□□□ 0.85
LdlrP35951 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LdlrP35951 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LdlrP35951 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.34■□□□□ 0.85
LdlrP35951 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LdlrP35951 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LdlrP35951 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LdlrP35951 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LdlrP35951 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.33■□□□□ 0.85
LdlrP35951 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.33■□□□□ 0.85
LdlrP35951 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
LdlrP35951 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LdlrP35951 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LdlrP35951 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LdlrP35951 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LdlrP35951 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LdlrP35951 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.32■□□□□ 0.84
LdlrP35951 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LdlrP35951 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LdlrP35951 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LdlrP35951 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.31■□□□□ 0.84
LdlrP35951 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.31■□□□□ 0.84
LdlrP35951 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
LdlrP35951 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms