Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.72■□□□□ 0.27
Rab5cP35278 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.72■□□□□ 0.27
Rab5cP35278 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.71■□□□□ 0.27
Rab5cP35278 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rab5cP35278 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rab5cP35278 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rab5cP35278 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rab5cP35278 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rab5cP35278 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rab5cP35278 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rab5cP35278 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rab5cP35278 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.7■□□□□ 0.26
Rab5cP35278 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rab5cP35278 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Rab5cP35278 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rab5cP35278 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.69■□□□□ 0.26
Rab5cP35278 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Gm9812-201ENSMUST00000061934 968 ntBASIC16.69■□□□□ 0.26
Rab5cP35278 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rab5cP35278 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab5cP35278 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab5cP35278 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rab5cP35278 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rab5cP35278 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.68■□□□□ 0.26
Rab5cP35278 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab5cP35278 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab5cP35278 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab5cP35278 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rab5cP35278 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab5cP35278 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.67■□□□□ 0.26
Rab5cP35278 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rab5cP35278 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab5cP35278 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rab5cP35278 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab5cP35278 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rab5cP35278 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rab5cP35278 Nkain2-201ENSMUST00000092602 558 ntBASIC16.67■□□□□ 0.26
Rab5cP35278 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Rab5cP35278 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab5cP35278 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.67■□□□□ 0.26
Rab5cP35278 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab5cP35278 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rab5cP35278 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab5cP35278 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.67■□□□□ 0.26
Rab5cP35278 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rab5cP35278 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab5cP35278 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab5cP35278 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rab5cP35278 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab5cP35278 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab5cP35278 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab5cP35278 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab5cP35278 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms