Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1bP25119 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.04■□□□□ 0.64
Tnfrsf1bP25119 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1bP25119 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1bP25119 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf1bP25119 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf1bP25119 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1bP25119 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
Tnfrsf1bP25119 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1bP25119 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1bP25119 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1bP25119 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1bP25119 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.98■□□□□ 0.63
Tnfrsf1bP25119 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1bP25119 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1bP25119 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1bP25119 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1bP25119 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1bP25119 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Tnfrsf1bP25119 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Tnfrsf1bP25119 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.96■□□□□ 0.63
Tnfrsf1bP25119 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1bP25119 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.95■□□□□ 0.62
Tnfrsf1bP25119 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms