Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.36■□□□□ 0.69
ChrneP20782 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChrneP20782 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ChrneP20782 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ChrneP20782 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChrneP20782 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ChrneP20782 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ChrneP20782 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.34■□□□□ 0.69
ChrneP20782 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
ChrneP20782 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.34■□□□□ 0.69
ChrneP20782 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ChrneP20782 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChrneP20782 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ChrneP20782 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.34■□□□□ 0.69
ChrneP20782 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChrneP20782 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ChrneP20782 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.33■□□□□ 0.68
ChrneP20782 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
ChrneP20782 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChrneP20782 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChrneP20782 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChrneP20782 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChrneP20782 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChrneP20782 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.32■□□□□ 0.68
ChrneP20782 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ChrneP20782 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChrneP20782 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ChrneP20782 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChrneP20782 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChrneP20782 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChrneP20782 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChrneP20782 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChrneP20782 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChrneP20782 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ChrneP20782 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ChrneP20782 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ChrneP20782 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ChrneP20782 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.3■□□□□ 0.68
ChrneP20782 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
ChrneP20782 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ChrneP20782 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 Iqck-206ENSMUST00000208658 2891 ntBASIC19.29■□□□□ 0.68
ChrneP20782 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ChrneP20782 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ChrneP20782 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ChrneP20782 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ChrneP20782 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.28■□□□□ 0.68
ChrneP20782 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
ChrneP20782 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ChrneP20782 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChrneP20782 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ChrneP20782 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ChrneP20782 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ChrneP20782 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ChrneP20782 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ChrneP20782 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ChrneP20782 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
ChrneP20782 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ChrneP20782 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChrneP20782 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChrneP20782 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
ChrneP20782 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChrneP20782 Gm12922-201ENSMUST00000120626 809 ntBASIC19.26■□□□□ 0.67
ChrneP20782 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ChrneP20782 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms