Protein–RNA interactions for Protein: P13516

Scd1, Acyl-CoA desaturase 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scd1P13516 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.32■□□□□ 0.84
Scd1P13516 Gm10420-201ENSMUST00000121713 882 ntBASIC20.32■□□□□ 0.84
Scd1P13516 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Scd1P13516 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.32■□□□□ 0.84
Scd1P13516 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scd1P13516 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.31■□□□□ 0.84
Scd1P13516 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.31■□□□□ 0.84
Scd1P13516 Gm12366-201ENSMUST00000121722 873 ntBASIC20.31■□□□□ 0.84
Scd1P13516 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.31■□□□□ 0.84
Scd1P13516 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.31■□□□□ 0.84
Scd1P13516 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.31■□□□□ 0.84
Scd1P13516 Gm5786-201ENSMUST00000085368 882 ntBASIC20.31■□□□□ 0.84
Scd1P13516 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.31■□□□□ 0.84
Scd1P13516 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scd1P13516 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Scd1P13516 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Scd1P13516 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scd1P13516 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.29■□□□□ 0.84
Scd1P13516 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Scd1P13516 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.29■□□□□ 0.84
Scd1P13516 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scd1P13516 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.29■□□□□ 0.84
Scd1P13516 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scd1P13516 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scd1P13516 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scd1P13516 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scd1P13516 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.28■□□□□ 0.84
Scd1P13516 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scd1P13516 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scd1P13516 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scd1P13516 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scd1P13516 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scd1P13516 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.27■□□□□ 0.84
Scd1P13516 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scd1P13516 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scd1P13516 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scd1P13516 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scd1P13516 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scd1P13516 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Scd1P13516 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scd1P13516 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.27■□□□□ 0.84
Scd1P13516 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scd1P13516 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scd1P13516 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scd1P13516 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scd1P13516 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scd1P13516 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scd1P13516 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scd1P13516 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scd1P13516 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scd1P13516 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scd1P13516 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.25■□□□□ 0.83
Scd1P13516 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scd1P13516 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.25■□□□□ 0.83
Scd1P13516 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.25■□□□□ 0.83
Scd1P13516 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scd1P13516 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scd1P13516 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.24■□□□□ 0.83
Scd1P13516 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scd1P13516 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scd1P13516 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Scd1P13516 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scd1P13516 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scd1P13516 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scd1P13516 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scd1P13516 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms