Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cntn1P12960 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cntn1P12960 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.71■□□□□ 0.75
Cntn1P12960 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cntn1P12960 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cntn1P12960 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntn1P12960 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntn1P12960 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntn1P12960 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Cntn1P12960 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cntn1P12960 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Cntn1P12960 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntn1P12960 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Cntn1P12960 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cntn1P12960 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Cntn1P12960 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.69■□□□□ 0.74
Cntn1P12960 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cntn1P12960 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cntn1P12960 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.68■□□□□ 0.74
Cntn1P12960 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cntn1P12960 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cntn1P12960 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cntn1P12960 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Cntn1P12960 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.67■□□□□ 0.74
Cntn1P12960 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cntn1P12960 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.67■□□□□ 0.74
Cntn1P12960 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cntn1P12960 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cntn1P12960 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cntn1P12960 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cntn1P12960 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Cntn1P12960 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cntn1P12960 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cntn1P12960 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cntn1P12960 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cntn1P12960 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.66■□□□□ 0.74
Cntn1P12960 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cntn1P12960 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cntn1P12960 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cntn1P12960 Gm7143-201ENSMUST00000222811 859 ntBASIC19.66■□□□□ 0.74
Cntn1P12960 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Cntn1P12960 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cntn1P12960 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cntn1P12960 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.65■□□□□ 0.74
Cntn1P12960 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cntn1P12960 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cntn1P12960 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cntn1P12960 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cntn1P12960 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
Cntn1P12960 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cntn1P12960 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.64■□□□□ 0.73
Cntn1P12960 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cntn1P12960 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cntn1P12960 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cntn1P12960 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cntn1P12960 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Cntn1P12960 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cntn1P12960 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cntn1P12960 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cntn1P12960 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.62■□□□□ 0.73
Cntn1P12960 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.62■□□□□ 0.73
Cntn1P12960 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.62■□□□□ 0.73
Cntn1P12960 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.62■□□□□ 0.73
Cntn1P12960 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cntn1P12960 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.61■□□□□ 0.73
Cntn1P12960 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Cntn1P12960 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.61■□□□□ 0.73
Cntn1P12960 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cntn1P12960 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.61■□□□□ 0.73
Cntn1P12960 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Cntn1P12960 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.61■□□□□ 0.73
Cntn1P12960 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Cntn1P12960 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cntn1P12960 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Cntn1P12960 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms