Protein–RNA interactions for Protein: P0DN34

Ndufb1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb1P0DN34 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufb1P0DN34 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufb1P0DN34 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ndufb1P0DN34 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufb1P0DN34 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufb1P0DN34 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ndufb1P0DN34 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Golph3-202ENSMUST00000226517 2359 ntBASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Ndufb1P0DN34 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ndufb1P0DN34 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ndufb1P0DN34 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Ndufb1P0DN34 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ndufb1P0DN34 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndufb1P0DN34 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ndufb1P0DN34 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms