Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
NefmP08553 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC30.42■■■□□ 2.46
NefmP08553 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NefmP08553 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NefmP08553 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NefmP08553 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
NefmP08553 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC30.41■■■□□ 2.46
NefmP08553 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC30.4■■■□□ 2.46
NefmP08553 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NefmP08553 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
NefmP08553 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NefmP08553 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NefmP08553 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NefmP08553 Gm28536-201ENSMUST00000190971 1317 ntBASIC30.4■■■□□ 2.46
NefmP08553 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC30.4■■■□□ 2.46
NefmP08553 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NefmP08553 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NefmP08553 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NefmP08553 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NefmP08553 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NefmP08553 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NefmP08553 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
NefmP08553 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC30.38■■■□□ 2.45
NefmP08553 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
NefmP08553 Gm8093-201ENSMUST00000128935 1892 ntBASIC30.38■■■□□ 2.45
NefmP08553 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
NefmP08553 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NefmP08553 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NefmP08553 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NefmP08553 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NefmP08553 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
NefmP08553 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC30.37■■■□□ 2.45
NefmP08553 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
NefmP08553 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
NefmP08553 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NefmP08553 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NefmP08553 Gm10420-201ENSMUST00000121713 882 ntBASIC30.36■■■□□ 2.45
NefmP08553 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC30.36■■■□□ 2.45
NefmP08553 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NefmP08553 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
NefmP08553 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.35■■■□□ 2.45
NefmP08553 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
NefmP08553 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NefmP08553 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NefmP08553 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
NefmP08553 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NefmP08553 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NefmP08553 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NefmP08553 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
NefmP08553 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NefmP08553 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NefmP08553 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NefmP08553 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NefmP08553 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NefmP08553 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
NefmP08553 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
NefmP08553 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NefmP08553 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.32■■■□□ 2.44
NefmP08553 Gm12366-201ENSMUST00000121722 873 ntBASIC30.32■■■□□ 2.44
NefmP08553 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.32■■■□□ 2.44
NefmP08553 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.32■■■□□ 2.44
NefmP08553 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.32■■■□□ 2.44
NefmP08553 Gm5786-201ENSMUST00000085368 882 ntBASIC30.32■■■□□ 2.44
NefmP08553 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NefmP08553 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
NefmP08553 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
NefmP08553 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
NefmP08553 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.31■■■□□ 2.44
NefmP08553 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NefmP08553 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NefmP08553 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
NefmP08553 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC30.3■■■□□ 2.44
NefmP08553 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
NefmP08553 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC30.3■■■□□ 2.44
NefmP08553 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NefmP08553 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NefmP08553 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NefmP08553 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
NefmP08553 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms