Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06328 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P06328 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
P06328 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.03■□□□□ -0
P06328 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06328 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
P06328 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.03■□□□□ -0
P06328 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06328 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
P06328 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
P06328 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
P06328 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06328 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P06328 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P06328 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
P06328 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06328 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06328 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
P06328 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06328 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06328 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P06328 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.02■□□□□ -0
P06328 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06328 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P06328 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.02□□□□□ -0.01
P06328 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.01□□□□□ -0.01
P06328 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06328 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
P06328 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06328 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06328 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.01□□□□□ -0.01
P06328 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06328 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P06328 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
P06328 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P06328 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15□□□□□ -0.01
P06328 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
P06328 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
P06328 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.99□□□□□ -0.01
P06328 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
P06328 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
P06328 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.99□□□□□ -0.01
P06328 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.99□□□□□ -0.01
P06328 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06328 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
P06328 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.98□□□□□ -0.01
P06328 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
P06328 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06328 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
P06328 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
P06328 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
P06328 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06328 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06328 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06328 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
P06328 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
P06328 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06328 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
P06328 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.96□□□□□ -0.01
P06328 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06328 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.96□□□□□ -0.01
P06328 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
P06328 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06328 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
P06328 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
P06328 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
P06328 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms