Protein–RNA interactions for Protein: O88958

Gnpda1, Glucosamine-6-phosphate isomerase 1, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gnpda1O88958 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Gnpda1O88958 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.11■□□□□ 0.81
Gnpda1O88958 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Gnpda1O88958 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Gnpda1O88958 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gnpda1O88958 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.1■□□□□ 0.81
Gnpda1O88958 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gnpda1O88958 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Gnpda1O88958 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.09■□□□□ 0.81
Gnpda1O88958 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
Gnpda1O88958 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gnpda1O88958 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gnpda1O88958 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gnpda1O88958 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Gnpda1O88958 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Gnpda1O88958 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.08■□□□□ 0.81
Gnpda1O88958 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gnpda1O88958 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gnpda1O88958 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Gnpda1O88958 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.07■□□□□ 0.8
Gnpda1O88958 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gnpda1O88958 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gnpda1O88958 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gnpda1O88958 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gnpda1O88958 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gnpda1O88958 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gnpda1O88958 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gnpda1O88958 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.06■□□□□ 0.8
Gnpda1O88958 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gnpda1O88958 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gnpda1O88958 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gnpda1O88958 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gnpda1O88958 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gnpda1O88958 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gnpda1O88958 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.05■□□□□ 0.8
Gnpda1O88958 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.05■□□□□ 0.8
Gnpda1O88958 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gnpda1O88958 Gm22238-201ENSMUST00000175222 88 ntBASIC20.04■□□□□ 0.8
Gnpda1O88958 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.04■□□□□ 0.8
Gnpda1O88958 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.04■□□□□ 0.8
Gnpda1O88958 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gnpda1O88958 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gnpda1O88958 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gnpda1O88958 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gnpda1O88958 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gnpda1O88958 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gnpda1O88958 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gnpda1O88958 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gnpda1O88958 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Gnpda1O88958 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gnpda1O88958 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gnpda1O88958 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Gnpda1O88958 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.02■□□□□ 0.8
Gnpda1O88958 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gnpda1O88958 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gnpda1O88958 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gnpda1O88958 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gnpda1O88958 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gnpda1O88958 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gnpda1O88958 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gnpda1O88958 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.01■□□□□ 0.79
Gnpda1O88958 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Gnpda1O88958 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.01■□□□□ 0.79
Gnpda1O88958 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gnpda1O88958 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gnpda1O88958 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gnpda1O88958 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gnpda1O88958 Gm5913-201ENSMUST00000119397 1399 ntBASIC20■□□□□ 0.79
Gnpda1O88958 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Gnpda1O88958 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms