Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hdac3O88895 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.26■□□□□ 0.51
Hdac3O88895 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac3O88895 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac3O88895 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac3O88895 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac3O88895 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac3O88895 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac3O88895 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.25■□□□□ 0.51
Hdac3O88895 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.25■□□□□ 0.51
Hdac3O88895 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hdac3O88895 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac3O88895 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac3O88895 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac3O88895 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac3O88895 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hdac3O88895 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac3O88895 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac3O88895 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac3O88895 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hdac3O88895 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.22■□□□□ 0.51
Hdac3O88895 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hdac3O88895 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.22■□□□□ 0.51
Hdac3O88895 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.22■□□□□ 0.51
Hdac3O88895 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hdac3O88895 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac3O88895 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac3O88895 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac3O88895 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac3O88895 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac3O88895 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac3O88895 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.21■□□□□ 0.51
Hdac3O88895 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hdac3O88895 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hdac3O88895 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.21■□□□□ 0.51
Hdac3O88895 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hdac3O88895 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hdac3O88895 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hdac3O88895 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.2■□□□□ 0.5
Hdac3O88895 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.2■□□□□ 0.5
Hdac3O88895 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac3O88895 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.19■□□□□ 0.5
Hdac3O88895 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.19■□□□□ 0.5
Hdac3O88895 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hdac3O88895 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.19■□□□□ 0.5
Hdac3O88895 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac3O88895 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hdac3O88895 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hdac3O88895 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hdac3O88895 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms