Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.65■□□□□ 0.74
Hcn3O88705 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.65■□□□□ 0.74
Hcn3O88705 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn3O88705 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.64■□□□□ 0.73
Hcn3O88705 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn3O88705 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn3O88705 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn3O88705 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hcn3O88705 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hcn3O88705 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn3O88705 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Hcn3O88705 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcn3O88705 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.63■□□□□ 0.73
Hcn3O88705 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.63■□□□□ 0.73
Hcn3O88705 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Hcn3O88705 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Hcn3O88705 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcn3O88705 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.62■□□□□ 0.73
Hcn3O88705 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcn3O88705 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hcn3O88705 Cap2-205ENSMUST00000225824 1634 ntBASIC19.62■□□□□ 0.73
Hcn3O88705 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Hcn3O88705 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn3O88705 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn3O88705 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.61■□□□□ 0.73
Hcn3O88705 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn3O88705 Gm7332-201ENSMUST00000118351 454 ntBASIC19.61■□□□□ 0.73
Hcn3O88705 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.61■□□□□ 0.73
Hcn3O88705 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn3O88705 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hcn3O88705 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hcn3O88705 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn3O88705 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn3O88705 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn3O88705 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn3O88705 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.6■□□□□ 0.73
Hcn3O88705 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hcn3O88705 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Hcn3O88705 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hcn3O88705 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hcn3O88705 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hcn3O88705 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.59■□□□□ 0.73
Hcn3O88705 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn3O88705 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn3O88705 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn3O88705 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcn3O88705 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hcn3O88705 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.58■□□□□ 0.72
Hcn3O88705 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.58■□□□□ 0.72
Hcn3O88705 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.58■□□□□ 0.72
Hcn3O88705 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcn3O88705 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcn3O88705 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.57■□□□□ 0.72
Hcn3O88705 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.57■□□□□ 0.72
Hcn3O88705 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcn3O88705 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hcn3O88705 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn3O88705 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn3O88705 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hcn3O88705 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn3O88705 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms