Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.06■□□□□ 0.96
Cldn2O88552 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn2O88552 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.06■□□□□ 0.96
Cldn2O88552 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn2O88552 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn2O88552 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn2O88552 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn2O88552 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Cldn2O88552 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn2O88552 Gm18284-201ENSMUST00000172604 624 ntBASIC21.05■□□□□ 0.96
Cldn2O88552 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn2O88552 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.05■□□□□ 0.96
Cldn2O88552 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn2O88552 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn2O88552 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cldn2O88552 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn2O88552 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.04■□□□□ 0.96
Cldn2O88552 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn2O88552 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn2O88552 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cldn2O88552 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn2O88552 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cldn2O88552 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.04■□□□□ 0.96
Cldn2O88552 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn2O88552 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cldn2O88552 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn2O88552 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn2O88552 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn2O88552 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn2O88552 Gm8495-201ENSMUST00000188740 694 ntBASIC21.03■□□□□ 0.96
Cldn2O88552 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.03■□□□□ 0.96
Cldn2O88552 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn2O88552 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cldn2O88552 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn2O88552 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.03■□□□□ 0.96
Cldn2O88552 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn2O88552 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn2O88552 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cldn2O88552 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.02■□□□□ 0.96
Cldn2O88552 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn2O88552 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn2O88552 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Cldn2O88552 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn2O88552 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.02■□□□□ 0.96
Cldn2O88552 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn2O88552 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Cldn2O88552 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
Cldn2O88552 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn2O88552 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn2O88552 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn2O88552 Gm43173-201ENSMUST00000202246 593 ntBASIC21.01■□□□□ 0.95
Cldn2O88552 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.01■□□□□ 0.95
Cldn2O88552 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn2O88552 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn2O88552 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn2O88552 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cldn2O88552 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21■□□□□ 0.95
Cldn2O88552 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn2O88552 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn2O88552 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn2O88552 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Cldn2O88552 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn2O88552 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn2O88552 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cldn2O88552 Gm43530-201ENSMUST00000195920 274 ntBASIC20.99■□□□□ 0.95
Cldn2O88552 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn2O88552 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn2O88552 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn2O88552 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.98■□□□□ 0.95
Cldn2O88552 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn2O88552 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn2O88552 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cldn2O88552 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn2O88552 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn2O88552 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.98■□□□□ 0.95
Cldn2O88552 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn2O88552 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.98■□□□□ 0.95
Cldn2O88552 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn2O88552 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn2O88552 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
Cldn2O88552 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn2O88552 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn2O88552 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn2O88552 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn2O88552 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.96■□□□□ 0.95
Cldn2O88552 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn2O88552 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.96■□□□□ 0.95
Cldn2O88552 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.96■□□□□ 0.95
Cldn2O88552 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn2O88552 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn2O88552 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn2O88552 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn2O88552 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cldn2O88552 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn2O88552 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn2O88552 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cldn2O88552 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn2O88552 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn2O88552 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn2O88552 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms