Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pknox1O70477 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pknox1O70477 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pknox1O70477 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pknox1O70477 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pknox1O70477 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.36■□□□□ 0.85
Pknox1O70477 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pknox1O70477 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.36■□□□□ 0.85
Pknox1O70477 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pknox1O70477 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pknox1O70477 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pknox1O70477 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.35■□□□□ 0.85
Pknox1O70477 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pknox1O70477 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pknox1O70477 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pknox1O70477 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pknox1O70477 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.35■□□□□ 0.85
Pknox1O70477 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pknox1O70477 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pknox1O70477 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pknox1O70477 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pknox1O70477 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Pknox1O70477 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pknox1O70477 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pknox1O70477 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pknox1O70477 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pknox1O70477 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pknox1O70477 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pknox1O70477 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.33■□□□□ 0.85
Pknox1O70477 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.33■□□□□ 0.85
Pknox1O70477 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pknox1O70477 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pknox1O70477 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
Pknox1O70477 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.32■□□□□ 0.84
Pknox1O70477 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Pknox1O70477 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Pknox1O70477 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pknox1O70477 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pknox1O70477 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pknox1O70477 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pknox1O70477 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pknox1O70477 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.29■□□□□ 0.84
Pknox1O70477 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pknox1O70477 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.29■□□□□ 0.84
Pknox1O70477 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pknox1O70477 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pknox1O70477 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pknox1O70477 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pknox1O70477 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.29■□□□□ 0.84
Pknox1O70477 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pknox1O70477 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pknox1O70477 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pknox1O70477 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.28■□□□□ 0.84
Pknox1O70477 Gm43566-201ENSMUST00000196851 808 ntBASIC20.28■□□□□ 0.84
Pknox1O70477 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.28■□□□□ 0.84
Pknox1O70477 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms