Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.34■□□□□ 0.85
Pdlim1O70400 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim1O70400 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim1O70400 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.33■□□□□ 0.85
Pdlim1O70400 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.33■□□□□ 0.85
Pdlim1O70400 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.33■□□□□ 0.85
Pdlim1O70400 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim1O70400 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.33■□□□□ 0.85
Pdlim1O70400 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.33■□□□□ 0.84
Pdlim1O70400 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim1O70400 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Pdlim1O70400 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim1O70400 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.31■□□□□ 0.84
Pdlim1O70400 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim1O70400 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim1O70400 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Pdlim1O70400 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim1O70400 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim1O70400 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Pdlim1O70400 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.29■□□□□ 0.84
Pdlim1O70400 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pdlim1O70400 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim1O70400 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim1O70400 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.28■□□□□ 0.84
Pdlim1O70400 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pdlim1O70400 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
Pdlim1O70400 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pdlim1O70400 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim1O70400 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim1O70400 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim1O70400 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim1O70400 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim1O70400 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim1O70400 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.27■□□□□ 0.84
Pdlim1O70400 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.27■□□□□ 0.84
Pdlim1O70400 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdlim1O70400 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdlim1O70400 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim1O70400 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim1O70400 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim1O70400 Gm12922-201ENSMUST00000120626 809 ntBASIC20.26■□□□□ 0.83
Pdlim1O70400 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.26■□□□□ 0.83
Pdlim1O70400 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim1O70400 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim1O70400 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim1O70400 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Pdlim1O70400 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.26■□□□□ 0.83
Pdlim1O70400 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim1O70400 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Pdlim1O70400 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.25■□□□□ 0.83
Pdlim1O70400 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim1O70400 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim1O70400 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.25■□□□□ 0.83
Pdlim1O70400 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim1O70400 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim1O70400 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim1O70400 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pdlim1O70400 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.24■□□□□ 0.83
Pdlim1O70400 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.24■□□□□ 0.83
Pdlim1O70400 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pdlim1O70400 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim1O70400 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pdlim1O70400 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim1O70400 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Pdlim1O70400 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.23■□□□□ 0.83
Pdlim1O70400 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim1O70400 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim1O70400 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim1O70400 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim1O70400 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.23■□□□□ 0.83
Pdlim1O70400 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pdlim1O70400 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim1O70400 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim1O70400 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pdlim1O70400 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim1O70400 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim1O70400 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pdlim1O70400 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.22■□□□□ 0.83
Pdlim1O70400 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pdlim1O70400 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms