Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Mir3960-201ENSMUST00000198213 73 ntBASIC16.18■□□□□ 0.18
Pde6dO55057 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6dO55057 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6dO55057 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6dO55057 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.18■□□□□ 0.18
Pde6dO55057 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pde6dO55057 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.17■□□□□ 0.18
Pde6dO55057 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6dO55057 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pde6dO55057 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pde6dO55057 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pde6dO55057 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pde6dO55057 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pde6dO55057 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6dO55057 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6dO55057 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pde6dO55057 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pde6dO55057 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.15■□□□□ 0.18
Pde6dO55057 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pde6dO55057 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Pde6dO55057 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.15■□□□□ 0.18
Pde6dO55057 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pde6dO55057 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.15■□□□□ 0.18
Pde6dO55057 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pde6dO55057 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6dO55057 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pde6dO55057 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.14■□□□□ 0.17
Pde6dO55057 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pde6dO55057 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pde6dO55057 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6dO55057 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.13■□□□□ 0.17
Pde6dO55057 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.13■□□□□ 0.17
Pde6dO55057 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.13■□□□□ 0.17
Pde6dO55057 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pde6dO55057 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6dO55057 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pde6dO55057 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.12■□□□□ 0.17
Pde6dO55057 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.12■□□□□ 0.17
Pde6dO55057 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.12■□□□□ 0.17
Pde6dO55057 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.12■□□□□ 0.17
Pde6dO55057 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6dO55057 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Pde6dO55057 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.11■□□□□ 0.17
Pde6dO55057 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pde6dO55057 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms