Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm43530-201ENSMUST00000195920 274 ntBASIC19.97■□□□□ 0.79
Cacna1bO55017 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1bO55017 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1bO55017 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cacna1bO55017 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1bO55017 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Cacna1bO55017 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1bO55017 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cacna1bO55017 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cacna1bO55017 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.96■□□□□ 0.79
Cacna1bO55017 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1bO55017 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1bO55017 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1bO55017 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1bO55017 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.94■□□□□ 0.78
Cacna1bO55017 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.94■□□□□ 0.78
Cacna1bO55017 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.94■□□□□ 0.78
Cacna1bO55017 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cacna1bO55017 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1bO55017 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1bO55017 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1bO55017 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1bO55017 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1bO55017 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.93■□□□□ 0.78
Cacna1bO55017 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1bO55017 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.92■□□□□ 0.78
Cacna1bO55017 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cacna1bO55017 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cacna1bO55017 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1bO55017 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1bO55017 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.91■□□□□ 0.78
Cacna1bO55017 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1bO55017 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1bO55017 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1bO55017 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1bO55017 Gm12933-201ENSMUST00000120203 872 ntBASIC19.91■□□□□ 0.78
Cacna1bO55017 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cacna1bO55017 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1bO55017 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.9■□□□□ 0.78
Cacna1bO55017 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacna1bO55017 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacna1bO55017 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.89■□□□□ 0.77
Cacna1bO55017 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacna1bO55017 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cacna1bO55017 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1bO55017 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cacna1bO55017 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cacna1bO55017 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1bO55017 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacna1bO55017 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.88■□□□□ 0.77
Cacna1bO55017 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.88■□□□□ 0.77
Cacna1bO55017 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacna1bO55017 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cacna1bO55017 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacna1bO55017 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacna1bO55017 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1bO55017 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1bO55017 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacna1bO55017 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Cacna1bO55017 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1bO55017 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.85■□□□□ 0.77
Cacna1bO55017 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.85■□□□□ 0.77
Cacna1bO55017 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1bO55017 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacna1bO55017 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms