Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf13O54965 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf13O54965 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rnf13O54965 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf13O54965 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf13O54965 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf13O54965 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.57■□□□□ 0.56
Rnf13O54965 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf13O54965 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf13O54965 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf13O54965 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf13O54965 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf13O54965 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf13O54965 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf13O54965 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf13O54965 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf13O54965 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf13O54965 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf13O54965 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf13O54965 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf13O54965 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf13O54965 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf13O54965 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf13O54965 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf13O54965 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf13O54965 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf13O54965 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf13O54965 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf13O54965 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf13O54965 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rnf13O54965 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf13O54965 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rnf13O54965 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf13O54965 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf13O54965 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rnf13O54965 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf13O54965 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rnf13O54965 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf13O54965 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf13O54965 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rnf13O54965 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf13O54965 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.52■□□□□ 0.56
Rnf13O54965 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf13O54965 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.52■□□□□ 0.56
Rnf13O54965 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf13O54965 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf13O54965 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf13O54965 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf13O54965 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf13O54965 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf13O54965 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf13O54965 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf13O54965 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rnf13O54965 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf13O54965 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.51■□□□□ 0.55
Rnf13O54965 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf13O54965 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf13O54965 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.51■□□□□ 0.55
Rnf13O54965 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf13O54965 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf13O54965 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.5■□□□□ 0.55
Rnf13O54965 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rnf13O54965 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf13O54965 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf13O54965 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.49■□□□□ 0.55
Rnf13O54965 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.49■□□□□ 0.55
Rnf13O54965 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms