Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lsm2O35900 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.37■□□□□ 0.53
Lsm2O35900 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.37■□□□□ 0.53
Lsm2O35900 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.37■□□□□ 0.53
Lsm2O35900 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.37■□□□□ 0.53
Lsm2O35900 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm2O35900 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm2O35900 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm2O35900 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm2O35900 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Lsm2O35900 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.36■□□□□ 0.53
Lsm2O35900 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm2O35900 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Lsm2O35900 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm2O35900 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm2O35900 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Lsm2O35900 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm2O35900 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm2O35900 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Lsm2O35900 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm2O35900 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm2O35900 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.35■□□□□ 0.53
Lsm2O35900 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lsm2O35900 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
Lsm2O35900 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.34■□□□□ 0.53
Lsm2O35900 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm2O35900 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm2O35900 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Lsm2O35900 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm2O35900 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.33■□□□□ 0.53
Lsm2O35900 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.33■□□□□ 0.52
Lsm2O35900 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm2O35900 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm2O35900 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm2O35900 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.32■□□□□ 0.52
Lsm2O35900 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lsm2O35900 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm2O35900 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm2O35900 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.31■□□□□ 0.52
Lsm2O35900 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lsm2O35900 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm2O35900 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm2O35900 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
Lsm2O35900 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.3■□□□□ 0.52
Lsm2O35900 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lsm2O35900 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lsm2O35900 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.3■□□□□ 0.52
Lsm2O35900 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm2O35900 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Lsm2O35900 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.29■□□□□ 0.52
Lsm2O35900 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.29■□□□□ 0.52
Lsm2O35900 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lsm2O35900 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm2O35900 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Lsm2O35900 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Lsm2O35900 Gm6311-201ENSMUST00000073790 878 ntBASIC18.28■□□□□ 0.52
Lsm2O35900 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lsm2O35900 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.28■□□□□ 0.52
Lsm2O35900 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm2O35900 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms