Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Matn3O35701 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.63■□□□□ 0.57
Matn3O35701 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn3O35701 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn3O35701 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Matn3O35701 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Matn3O35701 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Matn3O35701 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Matn3O35701 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn3O35701 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn3O35701 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn3O35701 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn3O35701 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Matn3O35701 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn3O35701 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.61■□□□□ 0.57
Matn3O35701 Gm45364-201ENSMUST00000210883 159 ntBASIC18.61■□□□□ 0.57
Matn3O35701 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Matn3O35701 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Matn3O35701 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn3O35701 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn3O35701 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn3O35701 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn3O35701 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn3O35701 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn3O35701 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Matn3O35701 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn3O35701 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Matn3O35701 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.59■□□□□ 0.57
Matn3O35701 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Matn3O35701 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.59■□□□□ 0.57
Matn3O35701 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Matn3O35701 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Matn3O35701 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Matn3O35701 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Matn3O35701 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Matn3O35701 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Matn3O35701 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Matn3O35701 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Matn3O35701 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.58■□□□□ 0.56
Matn3O35701 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Matn3O35701 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Matn3O35701 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.57■□□□□ 0.56
Matn3O35701 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn3O35701 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Matn3O35701 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Matn3O35701 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.56■□□□□ 0.56
Matn3O35701 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Matn3O35701 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Matn3O35701 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn3O35701 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.55■□□□□ 0.56
Matn3O35701 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Matn3O35701 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.55■□□□□ 0.56
Matn3O35701 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Matn3O35701 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.55■□□□□ 0.56
Matn3O35701 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn3O35701 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Matn3O35701 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.54■□□□□ 0.56
Matn3O35701 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Matn3O35701 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Matn3O35701 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn3O35701 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Matn3O35701 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms