Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Phox2bO35690 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Phox2bO35690 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Phox2bO35690 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
Phox2bO35690 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Phox2bO35690 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Phox2bO35690 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.61■□□□□ 0.89
Phox2bO35690 Gm27801-201ENSMUST00000184174 223 ntBASIC20.61■□□□□ 0.89
Phox2bO35690 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.61■□□□□ 0.89
Phox2bO35690 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.61■□□□□ 0.89
Phox2bO35690 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.61■□□□□ 0.89
Phox2bO35690 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Phox2bO35690 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Phox2bO35690 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
Phox2bO35690 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Phox2bO35690 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Phox2bO35690 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Phox2bO35690 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Phox2bO35690 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.6■□□□□ 0.89
Phox2bO35690 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Phox2bO35690 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.6■□□□□ 0.89
Phox2bO35690 Gm10033-202ENSMUST00000211874 928 ntBASIC20.6■□□□□ 0.89
Phox2bO35690 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.6■□□□□ 0.89
Phox2bO35690 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phox2bO35690 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.59■□□□□ 0.89
Phox2bO35690 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Phox2bO35690 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Phox2bO35690 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Phox2bO35690 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Gm10653-202ENSMUST00000139570 835 ntBASIC20.58■□□□□ 0.89
Phox2bO35690 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phox2bO35690 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.58■□□□□ 0.88
Phox2bO35690 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Phox2bO35690 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Phox2bO35690 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phox2bO35690 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Phox2bO35690 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Phox2bO35690 Gm40848-201ENSMUST00000221998 324 ntBASIC20.57■□□□□ 0.88
Phox2bO35690 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phox2bO35690 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Phox2bO35690 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Phox2bO35690 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phox2bO35690 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phox2bO35690 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phox2bO35690 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phox2bO35690 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.56■□□□□ 0.88
Phox2bO35690 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phox2bO35690 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.56■□□□□ 0.88
Phox2bO35690 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phox2bO35690 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phox2bO35690 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Phox2bO35690 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.55■□□□□ 0.88
Phox2bO35690 Gm7977-201ENSMUST00000193787 748 ntBASIC20.55■□□□□ 0.88
Phox2bO35690 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.55■□□□□ 0.88
Phox2bO35690 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.55■□□□□ 0.88
Phox2bO35690 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.55■□□□□ 0.88
Phox2bO35690 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.55■□□□□ 0.88
Phox2bO35690 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Phox2bO35690 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phox2bO35690 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.55■□□□□ 0.88
Phox2bO35690 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Phox2bO35690 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.54■□□□□ 0.88
Phox2bO35690 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phox2bO35690 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phox2bO35690 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phox2bO35690 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.53■□□□□ 0.88
Phox2bO35690 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phox2bO35690 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phox2bO35690 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phox2bO35690 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phox2bO35690 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms