Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm13148-201ENSMUST00000118892 745 ntBASIC19.75■□□□□ 0.75
Abca4O35600 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Abca4O35600 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca4O35600 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca4O35600 Gm13168-201ENSMUST00000121771 632 ntBASIC19.75■□□□□ 0.75
Abca4O35600 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca4O35600 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca4O35600 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
Abca4O35600 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Abca4O35600 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.74■□□□□ 0.75
Abca4O35600 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Abca4O35600 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.74■□□□□ 0.75
Abca4O35600 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.74■□□□□ 0.75
Abca4O35600 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.74■□□□□ 0.75
Abca4O35600 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.74■□□□□ 0.75
Abca4O35600 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca4O35600 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abca4O35600 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abca4O35600 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Abca4O35600 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abca4O35600 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Abca4O35600 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abca4O35600 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.73■□□□□ 0.75
Abca4O35600 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Abca4O35600 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.72■□□□□ 0.75
Abca4O35600 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Abca4O35600 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abca4O35600 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Abca4O35600 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.72■□□□□ 0.75
Abca4O35600 Gm13836-201ENSMUST00000121159 501 ntBASIC19.71■□□□□ 0.75
Abca4O35600 Mir5133-201ENSMUST00000174955 77 ntBASIC19.71■□□□□ 0.75
Abca4O35600 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.71■□□□□ 0.75
Abca4O35600 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abca4O35600 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.71■□□□□ 0.75
Abca4O35600 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Abca4O35600 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.7■□□□□ 0.74
Abca4O35600 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Abca4O35600 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca4O35600 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Abca4O35600 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.69■□□□□ 0.74
Abca4O35600 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.69■□□□□ 0.74
Abca4O35600 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.69■□□□□ 0.74
Abca4O35600 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca4O35600 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Abca4O35600 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.68■□□□□ 0.74
Abca4O35600 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.68■□□□□ 0.74
Abca4O35600 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca4O35600 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca4O35600 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca4O35600 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca4O35600 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.68■□□□□ 0.74
Abca4O35600 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca4O35600 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca4O35600 Gm43530-201ENSMUST00000195920 274 ntBASIC19.67■□□□□ 0.74
Abca4O35600 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Abca4O35600 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Abca4O35600 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Abca4O35600 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abca4O35600 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Abca4O35600 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Abca4O35600 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.65■□□□□ 0.74
Abca4O35600 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.65■□□□□ 0.74
Abca4O35600 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Abca4O35600 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Abca4O35600 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Abca4O35600 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca4O35600 Gm13234-201ENSMUST00000120010 747 ntBASIC19.64■□□□□ 0.74
Abca4O35600 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Abca4O35600 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abca4O35600 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abca4O35600 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abca4O35600 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abca4O35600 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.64■□□□□ 0.73
Abca4O35600 Gm10812-201ENSMUST00000099864 546 ntBASIC19.64■□□□□ 0.73
Abca4O35600 Reep4-203ENSMUST00000226563 1444 ntBASIC19.64■□□□□ 0.73
Abca4O35600 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Abca4O35600 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca4O35600 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.63■□□□□ 0.73
Abca4O35600 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca4O35600 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca4O35600 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms