Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clk4O35493 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk4O35493 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk4O35493 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clk4O35493 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk4O35493 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk4O35493 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.63■□□□□ 0.73
Clk4O35493 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk4O35493 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clk4O35493 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk4O35493 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk4O35493 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk4O35493 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk4O35493 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clk4O35493 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clk4O35493 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.62■□□□□ 0.73
Clk4O35493 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.62■□□□□ 0.73
Clk4O35493 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk4O35493 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk4O35493 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk4O35493 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk4O35493 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk4O35493 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.61■□□□□ 0.73
Clk4O35493 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk4O35493 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk4O35493 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk4O35493 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.61■□□□□ 0.73
Clk4O35493 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Clk4O35493 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk4O35493 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.6■□□□□ 0.73
Clk4O35493 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.6■□□□□ 0.73
Clk4O35493 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk4O35493 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk4O35493 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Clk4O35493 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk4O35493 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk4O35493 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk4O35493 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.59■□□□□ 0.73
Clk4O35493 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Gm14117-201ENSMUST00000122417 843 ntBASIC19.59■□□□□ 0.73
Clk4O35493 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk4O35493 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Clk4O35493 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Clk4O35493 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk4O35493 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk4O35493 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk4O35493 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk4O35493 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk4O35493 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Clk4O35493 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clk4O35493 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.57■□□□□ 0.72
Clk4O35493 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.57■□□□□ 0.72
Clk4O35493 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clk4O35493 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clk4O35493 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk4O35493 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Clk4O35493 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Clk4O35493 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.56■□□□□ 0.72
Clk4O35493 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clk4O35493 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk4O35493 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk4O35493 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk4O35493 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clk4O35493 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.56■□□□□ 0.72
Clk4O35493 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk4O35493 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk4O35493 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Clk4O35493 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clk4O35493 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.55■□□□□ 0.72
Clk4O35493 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk4O35493 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk4O35493 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk4O35493 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clk4O35493 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clk4O35493 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.53■□□□□ 0.72
Clk4O35493 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clk4O35493 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms