Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.86■■□□□ 1.89
Col15a1O35206 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Col15a1O35206 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Col15a1O35206 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Col15a1O35206 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.85■■□□□ 1.89
Col15a1O35206 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Col15a1O35206 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Col15a1O35206 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Col15a1O35206 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Col15a1O35206 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Col15a1O35206 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col15a1O35206 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col15a1O35206 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col15a1O35206 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC26.84■■□□□ 1.89
Col15a1O35206 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col15a1O35206 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col15a1O35206 Gm7291-201ENSMUST00000199147 382 ntBASIC26.84■■□□□ 1.89
Col15a1O35206 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Col15a1O35206 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Col15a1O35206 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
Col15a1O35206 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Col15a1O35206 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC26.83■■□□□ 1.88
Col15a1O35206 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
Col15a1O35206 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Col15a1O35206 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Col15a1O35206 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Col15a1O35206 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Col15a1O35206 Gm10493-201ENSMUST00000097270 612 ntBASIC26.83■■□□□ 1.88
Col15a1O35206 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Col15a1O35206 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Col15a1O35206 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Col15a1O35206 AC153962.1-201ENSMUST00000218530 1948 ntBASIC26.82■■□□□ 1.88
Col15a1O35206 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC26.82■■□□□ 1.88
Col15a1O35206 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Col15a1O35206 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Col15a1O35206 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col15a1O35206 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Col15a1O35206 Gm10849-201ENSMUST00000100397 618 ntBASIC26.81■■□□□ 1.88
Col15a1O35206 Gm43060-201ENSMUST00000200621 289 ntBASIC26.81■■□□□ 1.88
Col15a1O35206 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col15a1O35206 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC26.81■■□□□ 1.88
Col15a1O35206 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col15a1O35206 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC26.8■■□□□ 1.88
Col15a1O35206 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col15a1O35206 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col15a1O35206 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col15a1O35206 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col15a1O35206 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.79■■□□□ 1.88
Col15a1O35206 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col15a1O35206 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col15a1O35206 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC26.78■■□□□ 1.88
Col15a1O35206 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.78■■□□□ 1.88
Col15a1O35206 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Col15a1O35206 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Col15a1O35206 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Col15a1O35206 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.78■■□□□ 1.88
Col15a1O35206 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col15a1O35206 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col15a1O35206 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC26.77■■□□□ 1.88
Col15a1O35206 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Col15a1O35206 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col15a1O35206 Gm40848-201ENSMUST00000221998 324 ntBASIC26.76■■□□□ 1.87
Col15a1O35206 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.76■■□□□ 1.87
Col15a1O35206 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Col15a1O35206 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Col15a1O35206 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col15a1O35206 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col15a1O35206 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Col15a1O35206 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC26.75■■□□□ 1.87
Col15a1O35206 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col15a1O35206 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.75■■□□□ 1.87
Col15a1O35206 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Col15a1O35206 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
Col15a1O35206 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Col15a1O35206 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Col15a1O35206 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Col15a1O35206 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.73■■□□□ 1.87
Col15a1O35206 Smad6-203ENSMUST00000179458 273 ntBASIC26.73■■□□□ 1.87
Col15a1O35206 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC26.73■■□□□ 1.87
Col15a1O35206 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Col15a1O35206 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Col15a1O35206 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC26.72■■□□□ 1.87
Col15a1O35206 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.72■■□□□ 1.87
Col15a1O35206 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col15a1O35206 Gm27405-201ENSMUST00000184201 112 ntBASIC26.72■■□□□ 1.87
Col15a1O35206 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.72■■□□□ 1.87
Col15a1O35206 Gm10129-202ENSMUST00000193100 1316 ntBASIC26.72■■□□□ 1.87
Col15a1O35206 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col15a1O35206 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col15a1O35206 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col15a1O35206 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC26.72■■□□□ 1.87
Col15a1O35206 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms