Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.74■□□□□ 0.43
Gfra3O35118 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfra3O35118 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Gfra3O35118 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfra3O35118 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Gfra3O35118 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.74■□□□□ 0.43
Gfra3O35118 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.74■□□□□ 0.43
Gfra3O35118 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Gfra3O35118 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfra3O35118 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfra3O35118 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.74■□□□□ 0.43
Gfra3O35118 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gfra3O35118 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gfra3O35118 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.73■□□□□ 0.43
Gfra3O35118 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gfra3O35118 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.73■□□□□ 0.43
Gfra3O35118 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gfra3O35118 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gfra3O35118 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfra3O35118 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfra3O35118 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.72■□□□□ 0.43
Gfra3O35118 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Gfra3O35118 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfra3O35118 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfra3O35118 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfra3O35118 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfra3O35118 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.71■□□□□ 0.43
Gfra3O35118 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfra3O35118 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Gfra3O35118 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.71■□□□□ 0.43
Gfra3O35118 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfra3O35118 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfra3O35118 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfra3O35118 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Gfra3O35118 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Gfra3O35118 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Gfra3O35118 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Gfra3O35118 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gfra3O35118 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gfra3O35118 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Gfra3O35118 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfra3O35118 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.69■□□□□ 0.42
Gfra3O35118 Gm7143-201ENSMUST00000222811 859 ntBASIC17.69■□□□□ 0.42
Gfra3O35118 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.69■□□□□ 0.42
Gfra3O35118 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfra3O35118 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfra3O35118 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.68■□□□□ 0.42
Gfra3O35118 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfra3O35118 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfra3O35118 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.68■□□□□ 0.42
Gfra3O35118 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gfra3O35118 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfra3O35118 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfra3O35118 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.68■□□□□ 0.42
Gfra3O35118 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gfra3O35118 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Gfra3O35118 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfra3O35118 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfra3O35118 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.67■□□□□ 0.42
Gfra3O35118 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.67■□□□□ 0.42
Gfra3O35118 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfra3O35118 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gfra3O35118 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfra3O35118 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.67■□□□□ 0.42
Gfra3O35118 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfra3O35118 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
Gfra3O35118 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gfra3O35118 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gfra3O35118 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gfra3O35118 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gfra3O35118 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gfra3O35118 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfra3O35118 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gfra3O35118 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
Gfra3O35118 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gfra3O35118 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gfra3O35118 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.64■□□□□ 0.41
Gfra3O35118 Gm15039-201ENSMUST00000118914 875 ntBASIC17.64■□□□□ 0.41
Gfra3O35118 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms