Protein–RNA interactions for Protein: O09126

Sema4d, Semaphorin-4D, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4dO09126 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sema4dO09126 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sema4dO09126 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sema4dO09126 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sema4dO09126 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Sema4dO09126 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.29■■□□□ 1.16
Sema4dO09126 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sema4dO09126 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Sema4dO09126 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sema4dO09126 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sema4dO09126 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sema4dO09126 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
Sema4dO09126 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.28■■□□□ 1.16
Sema4dO09126 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sema4dO09126 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sema4dO09126 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.27■■□□□ 1.16
Sema4dO09126 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sema4dO09126 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.27■■□□□ 1.16
Sema4dO09126 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.27■■□□□ 1.15
Sema4dO09126 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sema4dO09126 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sema4dO09126 Gm7417-201ENSMUST00000192950 473 ntBASIC22.26■■□□□ 1.15
Sema4dO09126 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.26■■□□□ 1.15
Sema4dO09126 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sema4dO09126 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sema4dO09126 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sema4dO09126 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sema4dO09126 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Sema4dO09126 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sema4dO09126 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.25■■□□□ 1.15
Sema4dO09126 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sema4dO09126 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sema4dO09126 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sema4dO09126 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sema4dO09126 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Sema4dO09126 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sema4dO09126 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sema4dO09126 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.23■■□□□ 1.15
Sema4dO09126 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.23■■□□□ 1.15
Sema4dO09126 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sema4dO09126 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sema4dO09126 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sema4dO09126 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sema4dO09126 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sema4dO09126 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sema4dO09126 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sema4dO09126 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sema4dO09126 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Sema4dO09126 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
Sema4dO09126 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sema4dO09126 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Sema4dO09126 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.21■■□□□ 1.15
Sema4dO09126 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sema4dO09126 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sema4dO09126 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sema4dO09126 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sema4dO09126 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sema4dO09126 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sema4dO09126 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sema4dO09126 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.2■■□□□ 1.14
Sema4dO09126 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.2■■□□□ 1.14
Sema4dO09126 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Sema4dO09126 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sema4dO09126 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.19■■□□□ 1.14
Sema4dO09126 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.19■■□□□ 1.14
Sema4dO09126 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.19■■□□□ 1.14
Sema4dO09126 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sema4dO09126 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Sema4dO09126 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.18■■□□□ 1.14
Sema4dO09126 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Sema4dO09126 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sema4dO09126 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sema4dO09126 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sema4dO09126 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.18■■□□□ 1.14
Sema4dO09126 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Sema4dO09126 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.18■■□□□ 1.14
Sema4dO09126 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.18■■□□□ 1.14
Sema4dO09126 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.18■■□□□ 1.14
Sema4dO09126 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sema4dO09126 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.17■■□□□ 1.14
Sema4dO09126 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.17■■□□□ 1.14
Sema4dO09126 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.17■■□□□ 1.14
Sema4dO09126 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.17■■□□□ 1.14
Sema4dO09126 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sema4dO09126 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sema4dO09126 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.16■■□□□ 1.14
Sema4dO09126 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sema4dO09126 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sema4dO09126 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sema4dO09126 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.15■■□□□ 1.14
Sema4dO09126 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sema4dO09126 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms