Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.11■□□□□ 0.97
Atf6F6VAN0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.11■□□□□ 0.97
Atf6F6VAN0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.11■□□□□ 0.97
Atf6F6VAN0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf6F6VAN0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf6F6VAN0 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.1■□□□□ 0.97
Atf6F6VAN0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf6F6VAN0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atf6F6VAN0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atf6F6VAN0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atf6F6VAN0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Gm15820-201ENSMUST00000201566 728 ntBASIC21.09■□□□□ 0.97
Atf6F6VAN0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atf6F6VAN0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf6F6VAN0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atf6F6VAN0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atf6F6VAN0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Atf6F6VAN0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atf6F6VAN0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6F6VAN0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.07■□□□□ 0.96
Atf6F6VAN0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atf6F6VAN0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf6F6VAN0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atf6F6VAN0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Atf6F6VAN0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.05■□□□□ 0.96
Atf6F6VAN0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Atf6F6VAN0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Atf6F6VAN0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Gm5812-201ENSMUST00000061073 957 ntBASIC21.04■□□□□ 0.96
Atf6F6VAN0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.04■□□□□ 0.96
Atf6F6VAN0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf6F6VAN0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf6F6VAN0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf6F6VAN0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf6F6VAN0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf6F6VAN0 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.02■□□□□ 0.96
Atf6F6VAN0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Atf6F6VAN0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf6F6VAN0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf6F6VAN0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf6F6VAN0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf6F6VAN0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Atf6F6VAN0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf6F6VAN0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf6F6VAN0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.01■□□□□ 0.95
Atf6F6VAN0 Gm40881-201ENSMUST00000223397 166 ntBASIC21.01■□□□□ 0.95
Atf6F6VAN0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf6F6VAN0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Atf6F6VAN0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21■□□□□ 0.95
Atf6F6VAN0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21■□□□□ 0.95
Atf6F6VAN0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf6F6VAN0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.99■□□□□ 0.95
Atf6F6VAN0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Atf6F6VAN0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf6F6VAN0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms