Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sptbn4E9PX29 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptbn4E9PX29 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.92■□□□□ 0.62
Sptbn4E9PX29 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.92■□□□□ 0.62
Sptbn4E9PX29 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.92■□□□□ 0.62
Sptbn4E9PX29 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sptbn4E9PX29 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptbn4E9PX29 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptbn4E9PX29 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptbn4E9PX29 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptbn4E9PX29 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptbn4E9PX29 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sptbn4E9PX29 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptbn4E9PX29 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Sptbn4E9PX29 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.9■□□□□ 0.62
Sptbn4E9PX29 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.89■□□□□ 0.62
Sptbn4E9PX29 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.89■□□□□ 0.61
Sptbn4E9PX29 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sptbn4E9PX29 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptbn4E9PX29 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.87■□□□□ 0.61
Sptbn4E9PX29 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptbn4E9PX29 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.86■□□□□ 0.61
Sptbn4E9PX29 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sptbn4E9PX29 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.84■□□□□ 0.61
Sptbn4E9PX29 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.84■□□□□ 0.61
Sptbn4E9PX29 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptbn4E9PX29 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptbn4E9PX29 Mir5133-201ENSMUST00000174955 77 ntBASIC18.84■□□□□ 0.61
Sptbn4E9PX29 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.84■□□□□ 0.61
Sptbn4E9PX29 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.83■□□□□ 0.61
Sptbn4E9PX29 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sptbn4E9PX29 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sptbn4E9PX29 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sptbn4E9PX29 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.83■□□□□ 0.6
Sptbn4E9PX29 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sptbn4E9PX29 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.83■□□□□ 0.6
Sptbn4E9PX29 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Gm43530-201ENSMUST00000195920 274 ntBASIC18.82■□□□□ 0.6
Sptbn4E9PX29 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Gm13168-201ENSMUST00000121771 632 ntBASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptbn4E9PX29 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Gm13836-201ENSMUST00000121159 501 ntBASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn4E9PX29 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn4E9PX29 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Gm37856-201ENSMUST00000191634 999 ntBASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms