Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm4950D3YUM8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm4950D3YUM8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm4950D3YUM8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Gm43566-201ENSMUST00000196851 808 ntBASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm4950D3YUM8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm4950D3YUM8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4950D3YUM8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm4950D3YUM8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4950D3YUM8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4950D3YUM8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm4950D3YUM8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm4950D3YUM8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Gm13238-201ENSMUST00000117655 780 ntBASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm4950D3YUM8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm4950D3YUM8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm4950D3YUM8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Gm4950D3YUM8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gm4950D3YUM8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gm4950D3YUM8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm4950D3YUM8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms