Protein–RNA interactions for Protein: D3YUK0

Gm3259, Predicted gene 3259, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3259D3YUK0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3259D3YUK0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3259D3YUK0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm3259D3YUK0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3259D3YUK0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3259D3YUK0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3259D3YUK0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm3259D3YUK0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Gm5812-201ENSMUST00000061073 957 ntBASIC20.58■□□□□ 0.89
Gm3259D3YUK0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gm3259D3YUK0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Gm3259D3YUK0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm3259D3YUK0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3259D3YUK0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3259D3YUK0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3259D3YUK0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm3259D3YUK0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Gm3259D3YUK0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3259D3YUK0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm3259D3YUK0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3259D3YUK0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm3259D3YUK0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3259D3YUK0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3259D3YUK0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3259D3YUK0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.53■□□□□ 0.88
Gm3259D3YUK0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3259D3YUK0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.52■□□□□ 0.88
Gm3259D3YUK0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.52■□□□□ 0.88
Gm3259D3YUK0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3259D3YUK0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3259D3YUK0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm3259D3YUK0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3259D3YUK0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.49■□□□□ 0.87
Gm3259D3YUK0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms