Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12887B1AVM1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm12887B1AVM1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm12887B1AVM1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm12887B1AVM1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm12887B1AVM1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm12887B1AVM1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm12887B1AVM1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm12887B1AVM1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm12887B1AVM1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm12887B1AVM1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Gm11599-201ENSMUST00000118720 878 ntBASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Gm7432-201ENSMUST00000210343 879 ntBASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm12887B1AVM1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm12887B1AVM1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.55■□□□□ 0.24
Gm12887B1AVM1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm12887B1AVM1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms